# biology/libpll - The NetBSD Packages Collection

High-performance software library for phylogenetic analysis

    The aim of this project is to implement a versatile high-performance
    software library for phylogenetic analysis. The library should serve
    as a lower-level interface of PLL (Flouri et al. 2015) and should
    have the following properties:

        open source code with an appropriate open source license.
        64-bit multi-threaded design that handles very large datasets.
        easy to use and well-documented.
        SIMD implementations of time-consuming parts.
        as fast or faster likelihood computations than RAxML (Stamatakis 2014).
        fast implementation of the site repeats algorithm (Kobert 2017).
        functions for tree visualization.
        bindings for Python.
        generic and clean design.
        Linux, Mac, and Microsoft Windows compatibility.

- Source version: `libpll-0.3.2nb1`
- Maintainer: thomas.orgis AT uni-hamburg.de
- Website: https://github.com/xflouris/libpll/
- License: gnu-agpl-v3
- Package history: cvs, hg, git

## Build dependencies

devel/libtool-base pkgtools/mktools devel/bison devel/m4 pkgtools/cwrappers

## Runtime dependencies

(none)

## Binary packages

OS | Architecture | Version
--- | --- | ---
(none)

Binary packages can be installed with the high-level tool pkgin (which can be installed with pkg_add) or pkg_add(1) (installed by default). The NetBSD packages collection is also designed to permit easy installation from source.

## Available build options

(none)

## Known vulnerabilities

(no vulnerabilities known)

The pkg_admin audit command locates any installed package which has been mentioned in security advisories as having vulnerabilities.

Please note the vulnerabilities database might not be fully accurate, and not every bug is exploitable with every configuration.

Problem reports, updates or suggestions for this package should be reported with send-pr.